3-D Image Processing in Microscopy

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This page gives some links to software for 3-D image processing
available on the Web.



Collection of Web Sites for Image Processing, Visualization and Confocal Microscopy:

Digital Imaging Resources on the WWW (Exp.Path.Core, Arizona)
Videomicroscopy Internet Magazine
3-D Reconstruction (K.Montgomery, Nat.Biocomp.Ctr.)
Listing of image processing WWW-sites
Additional links


Meetings and Events:

Another IPL sub-page
Medical Image Processing (mostly local meetings)
List of image processing meetings
Visual 99


Image Processing Tools:

Image/J, Java-based tool, applets & plugins
Scioncorp. (NIH Image)
SCIL-Image


Archiving/Printing:

ThumbsPlus
ImageBook

Compression:

MT-Wice

Graphics Library:

Open GL Source Community

Surface Renderer:

Surfdriver(Win/NT)
3D-T.O.P./XW (IRIX)
Nuage (Delaunay triangulation, SGI/SUN)
Polygon data compression (CNR,Pisa)
Complete program set for compression (CNR,Pisa)


Volume Renderer:

SGI's Volumizer
BOB (AHPCRC, SGI)
VolVis (SUNY, Vislab)

Volume+Surface Renderer:

ANALYZE (Mayo Clinic)

AMIRA (org. C.Zuse Zentrum,Berlin)



Further (non-linked) references on the issue of volume rendering:

http://www.cis.ohio-state.edu/volviz/
http://www.cs.wpi.edu/~matt/courses/cs563/talks/powwie/p1/ray-cast.htm
http://www.cs.sunysb.edu/~csilva/papers/rpe/node8.html
http://rabbit.prakinf.tu-ilmenau.de/link2.html
http://www.radonc.uchicago.edu/sites.html
http://www.caip.rutgers.edu/~haray/dvr.html
http://vislab.eecs.uic.edu/~mansari1/intro_volume.html
http://cg.cis.nctu.edu.tw/seminar/9803031/sld001.htm
graphics.stanford.edu/papers/lacroute_thesis/
http://www.hpl.hp.com/personal/Craig_Wittenbrink/doc/pdpta98/tsld002.htm
http://www.cse.ucsc.edu/~craig/pdr.html
http://www.acl.lanl.gov/Viz/papers/paravr/paravr.html
http://www.nlm.nih.gov/research/visible/